2 blog posts, 11 pipeline releases, 6 upcoming events.

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nf-core newsletter

1st November 2025

Blog posts

nf-core core team retreat - September 2025
Updates from the nf-core core team retreat.
20 Oct 2025 · by christopher-hakkaart
nf-core/tools - 3.4.0
Container regex-it
16 Oct 2025 · by mashehu, mirpedrol

Pipeline releases

nf-core/ampliseq
v2.15.0 6 Oct 2025
nf-core/bacass
v2.5.0 17 Oct 2025
nf-core/demultiplex
v1.7.0 28 Oct 2025
nf-core/funcscan
v3.0.0 4 Oct 2025
nf-core/mag
v5.1.0 27 Oct 2025
nf-core/molkart
v1.2.0 27 Oct 2025
nf-core/proteinfamilies
v2.0.0 17 Oct 2025
nf-core/reportho
v1.1.0 21 Oct 2025
nf-core/sarek
v3.6.0 v3.6.1 24 Oct 2025
nf-core/scrnaseq
v4.1.0 30 Oct 2025
nf-core/viralrecon
v3.0.0 28 Oct 2025

Upcoming events

Talk Bytesize: The Nextflow plugin registry 11 Nov 2025
Phil Ewels, Seqera
Talk #animal-genomics: Meeting 19 Nov 2025
Ekaterina Osipova (Harvard University)
Talk Bytesize: nf-core pipeline template walk through V2 25 Nov 2025
Júlia Mir Pedrol, CRG
Talk Bytesize: topic channels in nf-core/modules 2 Dec 2025
Nicolas Vannieuwkerke, Center for Medical Genetics Ghent
Training Introduction to nf-core/airrflow 4 Dec 2025
Introductory practical workshop to nf-core/airrflow
Talk Bytesize: nf-core/reportho 9 Dec 2025
Igor Trujnara, Institute for Research in Biomedicine / Barcelona Supercomputing Center, Barcelona

In case you missed it

Hackathon - October 2025 (Barcelona)
28 Oct 2025 – 29 Oct 2025 Hackathon

New pipelines & proposals

New pipeline repositories

nf-core/seqsubmit In Development
nf-core pipeline for data submission to ENA

Pipeline proposals

From nf-core/proposals

nf-core/provacseq Accepted #82
nf-core/mspepid Accepted #78

Other proposals

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