Newsletter - October 2025
nf-core community newsletter for October 2025
1 blog post, 1 advisory, 8 pipeline releases, 6 upcoming events.
 1st October 2025 |
Blog posts
Running nf-core pipelines on Google Colab
A guide to running and interacting with nf-core pipelines using Colab and VS Code
2 Sept 2025 · by KurayiChawatama
A guide to running and interacting with nf-core pipelines using Colab and VS Code
2 Sept 2025 · by KurayiChawatama
Advisories
| high Known Regression Final family representative sequences are faulty in proteinfamilies pipeline 1.3.0 Bug inside the extract_family_reps.py script of v1.3.0 |
Pipeline releases
Upcoming events
| Talk #animal-genomics: October Meeting | 15 Oct 2025 |
| Daniela Lourenco (University of Georgia, USA) | |
| Hackathon Hackathon - October 2025 (Barcelona) | 28 Oct 2025 – 29 Oct 2025 |
| An in-person hackathon held in Barcelona | |
| Talk Bytesize: nf-core/mag v5.0 | 28 Oct 2025 |
| Diego Alvarez Saravia, University of Magallanes | |
| Talk Bytesize: The Nextflow plugin registry | 11 Nov 2025 |
| Phil Ewels, Seqera | |
| Talk #animal-genomics: Meeting | 19 Nov 2025 |
| Ekaterina Osipova (Harvard University) | |
| Talk Bytesize: nf-core pipeline template walk through V2 | 25 Nov 2025 |
| Júlia Mir Pedrol, CRG | |
In case you missed it
| Maintainers Minutes: August 2025 31 Aug 2025 |  |
| Why are my pipeline download tests failing? 28 Aug 2025 |  |
| Introducing nf-core Advisories 21 Aug 2025 |  |
| Maintainers Minutes: July 2025 31 Jul 2025 | |
| Meet the new meta.yml 7 Jul 2025 |  |
New pipelines & proposals
New pipeline repositories
|
nf-core/pacsomatic
In Development
Nextflow pipeline for PacBio HiFi tumor/normal somatic genomics |
Pipeline proposals
From nf-core/proposals
Other proposals
| This newsletter is brought to you by the nf-core community. |