Newsletter - October 2024
nf-core community newsletter for October 2024
1 blog post, 6 pipeline releases, 8 upcoming events.
 1st October 2024 |
Blog posts
Migration from Biocontainers to Seqera Containers: Part 1
What Seqera Containers is and why we want to move to it.
17 Sept 2024 · by ewels, edmundmiller
What Seqera Containers is and why we want to move to it.
17 Sept 2024 · by ewels, edmundmiller
Pipeline releases
Upcoming events
| Talk Bytesize: Animating subway maps | 1 Oct 2024 |
| Maxime Garcia, Seqera | |
| Talk Bytesize: Making Pipeline level tests with nf-test | 8 Oct 2024 |
| Maxime Garcia, Seqera | |
| Talk #regulatory - monthly meeting | 15 Oct 2024 |
| Round table in regulatory led by Alex Peltzer (Boehringer Ingelheim Pharma GmbH) | |
| Talk #animal-genomics: October Meeting | 16 Oct 2024 |
| Roderic Guigó (CRG, Spain) | |
| Hackathon Hackathon - October 2024 (Barcelona) | 28 Oct 2024 – 30 Oct 2024 |
| An in-person hackathon held in Barcelona | |
| Talk Bytesize: Special Interest Group - Animal Genomics | 12 Nov 2024 |
| Cedric Notredame (CRG, Barcelona), Björn Langer (CRG, Barcelona), Francesca Bernini (UNIMI, Milan), Jose Espinosa-Carrasco (CRG, Barcelona) | |
| Talk #regulatory - monthly meeting | 12 Nov 2024 |
| Round table in regulatory led by Alex Peltzer (Boehringer Ingelheim Pharma GmbH) | |
| Talk CANCELLED: #animal-genomics: November Meeting | 20 Nov 2024 |
| ~~Harris Lewin (Arizona State University, USA)~~ | |
In case you missed it
| Maintainers Minutes: September 2024 30 Aug 2024 |  |
| Maintainers Minutes: August 2024 14 Aug 2024 | |
| A gentle introduction to nf-core/reportho 18 Jul 2024 |  |
| nf-core/callingcards - first release! 17 Jul 2024 |  |
| Maintainers Minutes: July 2024 3 Jul 2024 |  |
| Faster nf-core website builds 3 Jul 2024 |  |
New pipelines & proposals
New pipeline repositories
|
nf-core/fastqrepair A pipeline that can be used to recover corrupted FASTQ.gz files, drop or fix uncompliant reads, remove unpaired reads, and settles reads that became disordered |
|
nf-core/genomeqc
In Development
Compare the quality of multiple genomes, along with their annotations. |
|
nf-core/pacvar Longread PacBio sequencing processing for WGS and PureTarget |
| This newsletter is brought to you by the nf-core community. |