Newsletter - July 2024
nf-core community newsletter for July 2024
3 blog posts, 12 pipeline releases, 5 upcoming events.
 1st July 2024 |
Blog posts
nf-core/fastquorum - first release!
The nf-core fgbio Best Practices FASTQ to Consensus Pipeline
22 Jun 2024 · by nh13
The nf-core fgbio Best Practices FASTQ to Consensus Pipeline
22 Jun 2024 · by nh13
Introducing nf-core office hours
A new initiative - weekly drop-in sessions to connect and work together.
13 Jun 2024 · by christopher-hakkaart
A new initiative - weekly drop-in sessions to connect and work together.
13 Jun 2024 · by christopher-hakkaart
Maintainers Minutes: June 2024
Keeping you informed of the latest maintainers discussions
7 Jun 2024 · by jfy133
Keeping you informed of the latest maintainers discussions
7 Jun 2024 · by jfy133
New pipeline first releases! 🎉
These pipelines just had their very first release.
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nf-core/demo
v1.0.0 nf-core/demo is a simple nf-core style bioinformatics pipeline for workshops and demos. |
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nf-core/reportho
v1.0.0 nf-core pipeline for comparative analysis of ortholog predictions |
Pipeline releases
Upcoming events
| Talk #regulatory: Kick Off Meeting | 1 Jul 2024 |
| Round table led by Alex Peltzer (Boehringer Ingelheim Pharma GmbH) | |
| Talk Bytesize: the `nf-core download` command | 9 Jul 2024 |
| Matthias Zepper, National Genomics Infrastructure, Stockholm | |
| Talk Bytesize: Six tips for community-based pipeline development | 16 Jul 2024 |
| James A. Fellows Yates, HKI Jena / MPI-EVA Leipzig | |
| Talk #animal-genomics: July Meeting | 17 Jul 2024 |
| Cristina Casto Rebollo, Institute for Animal Science and Technology (ICTA), Universitat Politècnica de València, Spain | |
| Talk Bytesize: nft-bam | 30 Jul 2024 |
| Nicolas Vannieuwkerke, Center For Medical Genetics Ghent | |
In case you missed it
| Maintainers Minutes: May 2024 13 May 2024 |  |
| nf-core/tools - 2.14.0 8 May 2024 |  |
| nf-core/sarek paper 24 Apr 2024 |  |
| March 2024 Hackathon 7 Apr 2024 |  |
| Special Interest Groups 2 Apr 2024 |  |
New pipelines & proposals
New pipeline repositories
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nf-core/denovotranscript A pipeline for de novo transcriptome assembly of paired-end short reads from bulk RNA-seq |
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nf-core/scdownstream
In Development
A single cell transcriptomics pipeline for QC, integration and making the data presentable |
| This newsletter is brought to you by the nf-core community. |