Newsletter - June 2024
nf-core community newsletter for June 2024
2 blog posts, 12 pipeline releases, 8 upcoming events.
 1st June 2024 |
Blog posts
Maintainers Minutes: May 2024
Keeping you informed of the latest maintainers discussions
13 May 2024 · by jfy133
Keeping you informed of the latest maintainers discussions
13 May 2024 · by jfy133
New pipeline first releases! 🎉
These pipelines just had their very first release.
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nf-core/callingcards
v1.0.0 A pipeline for processing calling cards data |
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nf-core/fastquorum
v1.0.0 Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs) |
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nf-core/viralmetagenome
v0.1.1 A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples. |
Pipeline releases
Upcoming events
| Talk Bytesize: Explaining Wave containers | 11 Jun 2024 |
| Phil Ewels, Seqera | |
| Talk #animal-genomics: June Meeting | 19 Jun 2024 |
| Yuliaxis Ramayo, Institute of Agrifood Research and Technology (IRTA), Spain | |
| Talk Bytesize: Containers for HPC with Singularity | 25 Jun 2024 |
| Marco Claudio De La Pierre, Seqera | |
| Talk #regulatory: Kick Off Meeting | 1 Jul 2024 |
| Round table led by Alex Peltzer (Boehringer Ingelheim Pharma GmbH) | |
| Talk Bytesize: the `nf-core download` command | 9 Jul 2024 |
| Matthias Zepper, National Genomics Infrastructure, Stockholm | |
| Talk Bytesize: Six tips for community-based pipeline development | 16 Jul 2024 |
| James A. Fellows Yates, HKI Jena / MPI-EVA Leipzig | |
| Talk #animal-genomics: July Meeting | 17 Jul 2024 |
| Cristina Casto Rebollo, Institute for Animal Science and Technology (ICTA), Universitat Politècnica de València, Spain | |
| Talk Bytesize: nft-bam | 30 Jul 2024 |
| Nicolas Vannieuwkerke, Center For Medical Genetics Ghent | |
In case you missed it
New pipelines & proposals
New pipeline repositories
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nf-core/demo nf-core/demo is a simple nf-core style bioinformatics pipeline for workshops and demos. |
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nf-core/lsmquant
In Development
A pipeline for processing and analysis of light-sheet microscopy images. |
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nf-core/pairgenomealign Pairwise genome comparison pipeline using the LAST software to align a list of query genomes to a target genome, and plot the results |
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nf-core/tbanalyzer
In Development
An nf-core (meta) pipeline for analysis of different members of Mycobacterium tuberculosis complex. |
| This newsletter is brought to you by the nf-core community. |