4 blog posts, 12 pipeline releases, 4 upcoming events.

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nf-core newsletter

1st December 2025

Blog posts

The Mass Spectrometry Proteomics Special Interest Group
Unifying efforts for mass spectrometry data analysis in nf-core
26 Nov 2025 · by DongzeHe
Topic: Topics
How to adopt Topic channels in your favorite nf-core module
19 Nov 2025 · by mapo9, nvnieuwk, mribeirodantas, kobelavaerts, wangdepin, yadavbha, eit-maxlcummins
nf-core/tools - 3.5.0
Hot topic release
19 Nov 2025 · by mashehu, mirpedrol
The nf-core roadmap for adopting the new Nextflow syntax
Not DSL3
17 Nov 2025 · by mirpedrol, mashehu

New pipeline first releases! 🎉

These pipelines just had their very first release.

nf-core/magmap v1.0.0
Best-practice analysis pipeline for mapping reads to a (large) collections of genomes

Pipeline releases

nf-core/createtaxdb
v2.0.0 14 Nov 2025
nf-core/detaxizer
v1.3.0 14 Nov 2025
nf-core/epitopeprediction
v3.1.0 21 Nov 2025
nf-core/mag
v5.2.0 7 Nov 2025
nf-core/methylong
v2.0.0 21 Nov 2025
nf-core/pixelator
v2.2.0 5 Nov 2025
nf-core/proteinfamilies
v2.1.0 25 Nov 2025
nf-core/rnafusion
v3.0.1b 14 Nov 2025
nf-core/rnaseq
v3.22.0 27 Nov 2025
nf-core/taxprofiler
v1.2.5 21 Nov 2025
nf-core/viralmetagenome
v1.0.0 4 Nov 2025

Upcoming events

Talk Bytesize: topic channels in nf-core/modules 2 Dec 2025
Nicolas Vannieuwkerke, Center for Medical Genetics Ghent
Training Introduction to nf-core/airrflow 4 Dec 2025
Introductory practical workshop to nf-core/airrflow
Talk Bytesize: nf-core/reportho 9 Dec 2025
Igor Trujnara, Institute for Research in Biomedicine / Barcelona Supercomputing Center, Barcelona
Talk Bytesize: Migrating to workflow outputs 27 Jan 2026
Chris Hakkaart, Seqera

In case you missed it

New pipelines & proposals

Pipeline proposals

From nf-core/proposals

nf-core/xmir Accepted #101
nf-core/genephylo Accepted #98
nf-core/cageflow Accepted #83
nf-core/netzoo Accepted #55

Other proposals

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