Newsletter - April 2024
nf-core community newsletter for April 2024
7 pipeline releases, 5 upcoming events.
 1st April 2024 |
New pipeline first releases! 🎉
These pipelines just had their very first release.
|
nf-core/detaxizer
v1.0.0 A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Removal is optional. |
Pipeline releases
Upcoming events
| Talk #animal-genomics: Inaugural Meeting | 17 Apr 2024 |
| Christa Kühn, Friedrich Loeffler Institute | |
| Talk Bytesize: Resolving merge conflicts after a tools release | 14 May 2024 |
| Kübra Narci, GHGA/DKFZ | |
| Talk #animal-genomics: May Meeting | 15 May 2024 |
| Alessandro Bagnato, Department of Veterinary Medicine, University of Milan, Italy | |
| Hackathon Hackathon - May 2024 (Boston) | 21 May 2024 – 22 May 2024 |
| An in-person hackathon held in Boston | |
| Talk Bytesize: Get your containers with "Nextflow inspect" | 28 May 2024 |
| Phil Ewels, Seqera | |
In case you missed it
| nf-core/tools - 2.13.0 19 Feb 2024 |  |
| core team retreat 11 Feb 2024 |  |
| nf-core/tools - 2.12.0 28 Jan 2024 |  |
| Hello nf-core world 12 Jan 2024 |  |
New pipelines & proposals
New pipeline repositories
|
nf-core/deepmodeloptim
In Development
Stochastic Testing and Input Manipulation for Unbiased Learning Systems |
|
nf-core/seqinspector Dedicated QC-only pipeline for sequencing data. The pipeline will run a (potentially large) set of QC tools and can output global and group specific Multiqc reports. The pipeline is targeting core facilities or research groups with larger sequencing throughput. |
|
nf-core/spatialxe
In Development
|
|
nf-core/tfactivity
In Development
Bioinformatics pipeline that makes use of expression and open chromatin data to identify differentially active transcription factors across conditions. |
| This newsletter is brought to you by the nf-core community. |