Newsletter - November 2022
nf-core community newsletter for November 2022
8 pipeline releases, 6 upcoming events.
 1st November 2022 |
New pipeline first releases! 🎉
These pipelines just had their very first release.
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nf-core/demultiplex
v1.0.0 Demultiplexing pipeline for sequencing data |
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nf-core/hgtseq
v1.0.0 A pipeline to investigate horizontal gene transfer from NGS data |
Pipeline releases
Upcoming events
| Talk Bytesize: nf-core/nascent | 1 Nov 2022 |
| Edmund Miller - University of Texas at Dallas, USA | |
| Talk Bytesize: Configuring lint tests | 8 Nov 2022 |
| Phil Ewels, Seqera labs | |
| Talk Bytesize: using custom scripts in Nextflow pipelines | 15 Nov 2022 |
| Chris Hakkaart, Seqera labs | |
| Talk Bytesize: Subworkflows | 22 Nov 2022 |
| Maxime Garcia, Seqera labs | |
| Talk Bytesize: Working with GitHub using VSCode and Github CLI | 29 Nov 2022 |
| Phil Ewels, Seqera labs | |
| Talk Bytesize: nf-test | 6 Dec 2022 |
| Edmund Miller, University of Texas at Dallas | |
In case you missed it
New pipelines & proposals
New pipeline repositories
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nf-core/callingcards A pipeline for processing calling cards data |
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nf-core/differentialabundance Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq |
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nf-core/sammyseq
In Development
Pipeline for Sequential Analysis of MacroMolecules accessibilitY sequencing (SAMMY-seq) data, to analyze chromatin state. |
| This newsletter is brought to you by the nf-core community. |