1 pipeline release, 7 upcoming events.

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nf-core newsletter

1st March 2022

Pipeline releases

nf-core/viralrecon
v2.3 v2.3.1 v2.4 22 Feb 2022

Upcoming events

Talk Bytesize 35: Troubleshooting a failed pipeline 1 Mar 2022
Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden
Talk Bytesize 36: Customising your MultiQC reports 8 Mar 2022
Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden
Talk Bytesize 37: Gather Town 15 Mar 2022
James A. Fellows Yates - Leibniz-HKI / MPI-EVA
Hackathon Hackathon - March 2022 16 Mar 2022 – 18 Mar 2022
A virtual online hackathon to develop nf-core together
Talk Bytesize 40: Software packaging 5 Apr 2022
Alexander Peltzer - Boehringer Ingelheim Pharma GmbH & Co. KG, Germany
Talk EuroFAANG Training Workshop 7 Apr 2022
Best practice for preparing pipelines in nf-core and recording pipeline usage in FAANG submissions
Talk Bytesize 41: Code linting tools 12 Apr 2022
Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden

In case you missed it

New pipelines & proposals

New pipeline repositories

nf-core/genomeannotator In Development
Pipeline for the identification of (coding) gene structures in draft genomes.
nf-core/spatialvi In Development
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
nf-core/taxprofiler
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

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