7 pipeline releases, 4 upcoming events.

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nf-core newsletter

1st June 2021

New pipeline first releases! 🎉

These pipelines just had their very first release.

nf-core/bactmap vv0.9 v0.9.1
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
nf-core/metaboigniter v1.0.0 v1.0.1
Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.

Pipeline releases

nf-core/eager
v2.3.4 5 May 2021
nf-core/hic
v1.3.0 25 May 2021
nf-core/methylseq
v1.6.1 9 May 2021
nf-core/rnaseq
v3.1 13 May 2021
nf-core/viralrecon
v2.0 13 May 2021

Upcoming events

Talk Bytesize 15: Pipeline first release 1 Jun 2021
Alexander Peltzer - Boehringer Ingelheim Pharma GmbH & Co. KG, Germany
Talk Bytesize 16: Modules test data 8 Jun 2021
Kevin Menden - QBiC Tübingen, Germany
Talk Bytesize 17: Pytest workflow 15 Jun 2021
Edmund Miller - University of Texas at Dallas
Talk Bytesize 18: Development environments & workflows II 22 Jun 2021
Maxime Garcia - SciLifeLab / Karolinska Institutet, Sweden

In case you missed it

New pipelines & proposals

New pipeline repositories

nf-core/rnavar
gatk4 RNA variant calling pipeline

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